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12 Bio - DNA & Proteins

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  • Prokaryotic DNA is in what form?
    a single circular double stranded chromosome
  • What is a nonsense mutation?
    a stop codon replacing a regular amino acid codon; leading to a shortened polypeptide
  • What does the primary structure of a protein refer to?
    the initial linear structure
  • List 4 functional proteins
    Enzymes, receptor proteins, hormones, antibodies, regulatory proteins
  • Which base alterations result in a frame shift mutation?
    base insertion or deletions
  • Uses for Gel electrophoresis?
    paternity testing, crime scene analysis - innocence vs guilty.
  • What are the 3 types of genes involved in cancer?
    Oncogenes(tumour-genes), tumour suppression genes and DNA repair genes
  • Why is the bond between the base pairs weak?
    so that they can be separated easily then replicated.
  • What does the tertiary structure refer to?
    the 3D shape of the protein after it has been folded
  • Explain Gel electrophoresis.
    DNA is injected into wells, the gel is placed in a buffer solution, there is 2 electrodes & a current is run through it, separating DNA based on size and charg.
  • What is a gene?
    short segments coding for particular characteristic or trait
  • What are the steps of DNA cloning?
    1. restrictions enzymes, 2. Ligation, 3. Transformation, 4. Selection
  • List the 3 types of base alterations that can occur?
    Substitution, insertion or deletion
  • List 2 factors affecting gene expression
    Gender, chemicals, temperature and products of other genes
  • What causes cancer?
    Uncontrolled cell division/
  • Which 2 organelles in Eukaryotes posses extra DNA?
    Mitochondria and Chloroplasts
  • Define plutipotent
    can develop into any kind of human cell
  • What is cell differentiation?
    the process by which cells with identical DNA become varied in structure and function
  • What does the secondary structure of a protein refer to?
    the intermediates before it folds into 3D structure - ie alpha helices and beta pleated sheets.
  • Explain the process of PCR
    temp up to 90 degrees DNA separates, temp lowered to 60 - primers added and bind to target regions, temp raised to 72 - DNA polymerase begins building strands
  • What is a silent mutation?
    a change in base pairs leading to no noticeable effect
  • names 2 types of regulatory proteins.
    Activators and repressors
  • What does the quaternary structure refer to?
    two or more polypeptide chains (tertiary structures) chemically bonded.
  • What does a codon code for?
    An amino acid
  • Explain semi-conservative DNA replication
    helicase unwinds the double helix, DNA polymerase binds and uses free nucleotides to build the complementary strand from the exposed template
  • What is CRISPR-Cas9?
    1. Guide RNA binding, 2. DNA cleavage, 3. DNA repair
  • What is a missense mutation?
    a change in a base pair leading to a change in 1 amino acid in a polypeptide chain
  • Define multipotent
    can develop into particular types - only some
  • What is a codon?
    3 base pairs on the mRNA strand
  • What is a mutation?
    A direct and permanent change to the sequence of DNA bases itself
  • Explain the process of transcription
    Helicase unwinds the double helix, RNA polymerase builds the mRNA strand from free nucleotides and this leaves the nucleus and travels to the ribosome
  • State 2 types of inhibitors and how they work.
    Competitive - bind to the active site blocking substrates, non-competitive bind to the allosteric site altering the shape of the active site.
  • What does enzymes do to rates of reaction and how?
    they speed up the rate of reaction, by bringing together substrates or breaking them down through the lowering of activation energy
  • What is DNA methylation?
    is a process which involves the addition of a methyl group (CH3) to the DNA strand (commonly to cytosine)
  • List 4 factors that affect enzyme activity
    Temperature, pH, reactant concentration, Enzyme concentration, product concentration, inhibitors
  • What is DNA replication?
    where the DNA is copied
  • what is activation energy?
    the energy required for the reaction to happen
  • What is a telomere?
    A non-coding DNA region at the end of a chromosome
  • What is protein synthesis?
    building of proteins
  • in RNA what binds to adenosine instead of thymine?
    Uracil
  • What is translation?
    Where the mRNA that has been transcribed is read by the tRNA and the corresponding amino acid chain is created
  • Prokaryotic cells lack what type of organelles?
    membrane bound organelles
  • Applications of CRISPR-Cas9
    Medicine, agricultures, research
  • What is a nucleotide made of?
    A phosphate, deoxyribose sugar and a nitrogen base (A, T, G or C).
  • What is an intron?
    The non-coding part of the DNA
  • Where is the DNA located in a prokaryotic cell?
    nucleoid region
  • What is an exon?
    the coding part of the DNA
  • What does epigenetic changes mean?
    the effect of environmental factors in changing DNA and histones
  • What is an anti-codon?
    the complementary base pairs to the codon found on the tRNA
  • Why is DNA replication called 'semi-conservative'?
    Because each molecule has one new and one old strand.
  • Explain the induced fit model.
    Enzymes active site alters slightly to be an exact fit to the substrate
  • What does DNA stand for
    Deoxyribonucleic acid